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@ -84,18 +84,6 @@ |
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"N = 40 # number of cells" |
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"N = 40 # number of cells" |
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] |
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] |
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}, |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [], |
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"source": [] |
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}, |
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{ |
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{ |
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"cell_type": "code", |
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"cell_type": "code", |
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"execution_count": 3, |
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"execution_count": 3, |
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@ -410,60 +398,6 @@ |
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"plt.imshow(res_reshaped[:, :, 0], cmap='viridis')" |
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"plt.imshow(res_reshaped[:, :, 0], cmap='viridis')" |
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] |
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] |
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}, |
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}, |
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{ |
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"cell_type": "markdown", |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"name": "#%% md\n" |
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} |
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}, |
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"source": [ |
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"## Persistence for different dimensions" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": 17, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [], |
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"source": [ |
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"# persistence.persistence(res, 1)" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": 18, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [], |
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"source": [ |
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"# persistence.persistence(res, 2)" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": 19, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [], |
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"source": [ |
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"# persistence.persistence(res, 3)" |
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] |
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}, |
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{ |
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{ |
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"cell_type": "markdown", |
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"cell_type": "markdown", |
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"metadata": { |
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"metadata": { |
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@ -834,6 +768,13 @@ |
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"plt.scatter(phi_deg[::step], param_1)" |
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"plt.scatter(phi_deg[::step], param_1)" |
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] |
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] |
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}, |
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}, |
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{ |
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"cell_type": "markdown", |
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"metadata": {}, |
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"source": [ |
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"#### Orientation is decoded:" |
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] |
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}, |
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{ |
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{ |
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"cell_type": "code", |
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"cell_type": "code", |
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"execution_count": 42, |
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"execution_count": 42, |
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@ -983,90 +924,6 @@ |
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"plt.title(\"Parameter 2 of CP vs. phase\")\n", |
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"plt.title(\"Parameter 2 of CP vs. phase\")\n", |
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"plt.scatter(phi_deg[::step], param_2)" |
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"plt.scatter(phi_deg[::step], param_2)" |
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] |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": 36, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"is_executing": true, |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [ |
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{ |
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"ename": "IndexError", |
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"evalue": "index 288 is out of bounds for axis 0 with size 260", |
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"output_type": "error", |
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"traceback": [ |
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"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m", |
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"\u001b[0;31mIndexError\u001b[0m Traceback (most recent call last)", |
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"\u001b[1;32m/home/ennucore/dev/amgen/PopulationSampling.ipynb Cell 46\u001b[0m in \u001b[0;36m<cell line: 1>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> <a href='vscode-notebook-cell:/home/ennucore/dev/amgen/PopulationSampling.ipynb#ch0000042?line=0'>1</a>\u001b[0m plt\u001b[39m.\u001b[39mscatter([phi_deg[i] \u001b[39m*\u001b[39m \u001b[39m180\u001b[39m \u001b[39m/\u001b[39m np\u001b[39m.\u001b[39mpi \u001b[39mfor\u001b[39;00m i \u001b[39min\u001b[39;00m phi_reorder], [param_2[i] \u001b[39mfor\u001b[39;00m i \u001b[39min\u001b[39;00m phi_reorder])\n", |
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"\u001b[1;32m/home/ennucore/dev/amgen/PopulationSampling.ipynb Cell 46\u001b[0m in \u001b[0;36m<listcomp>\u001b[0;34m(.0)\u001b[0m\n\u001b[0;32m----> <a href='vscode-notebook-cell:/home/ennucore/dev/amgen/PopulationSampling.ipynb#ch0000042?line=0'>1</a>\u001b[0m plt\u001b[39m.\u001b[39mscatter([phi_deg[i] \u001b[39m*\u001b[39m \u001b[39m180\u001b[39m \u001b[39m/\u001b[39m np\u001b[39m.\u001b[39mpi \u001b[39mfor\u001b[39;00m i \u001b[39min\u001b[39;00m phi_reorder], [param_2[i] \u001b[39mfor\u001b[39;00m i \u001b[39min\u001b[39;00m phi_reorder])\n", |
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"\u001b[0;31mIndexError\u001b[0m: index 288 is out of bounds for axis 0 with size 260" |
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] |
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} |
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], |
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"source": [ |
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"plt.scatter([phi_deg[i] * 180 / np.pi for i in phi_reorder], [param_2[i] for i in phi_reorder])" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"is_executing": true, |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [], |
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"source": [ |
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"plt.scatter([theta_deg[i] for i in theta_reorder], [param_2[i] for i in theta_reorder])" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"is_executing": true, |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [], |
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"source": [ |
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"phi_reorder[:10]" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"is_executing": true, |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [], |
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"source": [] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": { |
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"collapsed": false, |
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"pycharm": { |
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"is_executing": true, |
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"name": "#%%\n" |
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} |
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}, |
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"outputs": [], |
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"source": [] |
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} |
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} |
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], |
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], |
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"metadata": { |
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"metadata": { |
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